index
:
freebsd-ports
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2015Q1
2015Q2
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release/RELEASE_10_1_0@371354
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release/RELEASE_10_2_0@393385
release/RELEASE_10_3_0
release/RELEASE_10_3_0@410732
release/RELEASE_10_4_0
release/RELEASE_10_4_0@449333
release/RELEASE_10_EOL
release/RELEASE_11_0_0
release/RELEASE_11_0_0@421132
release/RELEASE_11_0_0@421527
release/RELEASE_11_1_0
release/RELEASE_11_1_0@445463
release/RELEASE_11_2_0
release/RELEASE_11_2_0@471740
release/RELEASE_11_3_0
release/RELEASE_11_3_0@504456
release/RELEASE_11_4_0
release/RELEASE_11_4_0@536540
release/RELEASE_12_0_0
release/RELEASE_12_0_0@485372
release/RELEASE_12_1_0
release/RELEASE_12_1_0@514475
release/RELEASE_12_2_0
release/RELEASE_12_2_0@551550
release/RELEASE_13_0_0
release/RELEASE_13_0_0@567285
release/RELEASE_2_0
release/RELEASE_2_2_1
release/RELEASE_2_2_2
release/RELEASE_2_2_5
release/RELEASE_2_2_6
release/RELEASE_2_2_7
release/RELEASE_2_2_8
release/RELEASE_3_0_0
release/RELEASE_3_1_0
release/RELEASE_3_2_0
release/RELEASE_3_3_0
release/RELEASE_3_4_0
release/RELEASE_3_5_0
release/RELEASE_4_0_0
release/RELEASE_4_10_0
release/RELEASE_4_11_0
release/RELEASE_4_1_0
release/RELEASE_4_1_1
release/RELEASE_4_2_0
release/RELEASE_4_3_0
release/RELEASE_4_4_0
release/RELEASE_4_5_0
release/RELEASE_4_6_0
release/RELEASE_4_6_1
release/RELEASE_4_6_2
release/RELEASE_4_7_0
release/RELEASE_4_8_0
release/RELEASE_4_9_0
release/RELEASE_4_EOL
release/RELEASE_5_0_0
release/RELEASE_5_0_DP1
release/RELEASE_5_1_0
release/RELEASE_5_2_0
release/RELEASE_5_2_1
release/RELEASE_5_3_0
release/RELEASE_5_4_0
release/RELEASE_5_5_0
release/RELEASE_5_EOL
release/RELEASE_6_0_0
release/RELEASE_6_1_0
release/RELEASE_6_2_0
release/RELEASE_6_3_0
release/RELEASE_6_4_0
release/RELEASE_6_EOL
release/RELEASE_7_0_0
release/RELEASE_7_1_0
release/RELEASE_7_2_0
release/RELEASE_7_3_0
release/RELEASE_7_4_0
release/RELEASE_7_EOL
release/RELEASE_8_0_0
release/RELEASE_8_1_0
release/RELEASE_8_2_0
release/RELEASE_8_3_0
release/RELEASE_8_4_0
release/RELEASE_8_4_0@316235
release/RELEASE_8_EOL
release/RELEASE_9_0_0
release/RELEASE_9_1_0
release/RELEASE_9_1_0@308517
release/RELEASE_9_2_0
release/RELEASE_9_2_0@328998
release/RELEASE_9_3_0
release/RELEASE_9_3_0@358632
release/RELEASE_9_3_0@358973
release/RELEASE_9_3_0@359466
release/RELEASE_9_EOL
release/RELENG_2_0_5
release/RELENG_2_0_5_ALPHA
release/RELENG_2_0_5_BP
release/RELENG_2_0_5_RELEASE
release/RELENG_2_1_0_BP
release/RELENG_2_1_0_RELEASE
release/RELENG_2_1_0_RELEASE@2276
release/RELENG_2_1_5_RELEASE
release/RELENG_2_1_5_RELEASE@3283
release/RELENG_2_1_6_1_RELEASE
release/RELENG_2_1_6_1_RELEASE@4455
release/RELENG_2_1_6_RELEASE
release/RELENG_2_1_6_RELEASE@4455
release/RELENG_2_1_7_RELEASE
release/RELENG_2_1_7_RELEASE@5435
release/RELENG_2_2_0_RELEASE
release/RELENG_2_2_0_RELEASE@5880
release/RELENG_2_2_1_RELEASE
release/RELENG_2_2_1_RELEASE@5880
release/RELENG_2_2_2_RELEASE
release/RELENG_2_2_2_RELEASE@6367
release/RELENG_2_2_5_RELEASE
release/RELENG_2_2_5_RELEASE@8169
release/RELENG_2_2_6_RELEASE
release/RELENG_2_2_6_RELEASE@10302
release/RELENG_2_2_7_RELEASE
release/RELENG_2_2_7_RELEASE@11969
release/RELENG_2_2_8_RELEASE
release/RELENG_2_2_8_RELEASE@14881
release/RELENG_2_2_BP
release/RELENG_3
release/RELENG_3_0_0_RELEASE
release/RELENG_3_BP
FreeBSD Ports
delphij@delphij.net
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
biology
Mode
Name
Size
-rw-r--r--
Makefile
4484
log
plain
d---------
abyss
178
log
plain
d---------
ad2vcf
109
log
plain
d---------
artemis
146
log
plain
d---------
avida
141
log
plain
d---------
babel
141
log
plain
d---------
bamtools
178
log
plain
d---------
bcftools
178
log
plain
d---------
bedtools
178
log
plain
d---------
bioawk
141
log
plain
d---------
biococoa
146
log
plain
d---------
biolibc
146
log
plain
d---------
bioparser
146
log
plain
d---------
biosoup
109
log
plain
d---------
bolt-lmm
178
log
plain
d---------
bowtie
178
log
plain
d---------
bowtie2
178
log
plain
d---------
bwa
141
log
plain
d---------
canu
178
log
plain
d---------
cd-hit
178
log
plain
d---------
cdbfasta
141
log
plain
d---------
checkm
109
log
plain
d---------
clustal-omega
146
log
plain
d---------
clustalw
141
log
plain
d---------
cufflinks
141
log
plain
d---------
cytoscape
109
log
plain
d---------
ddocent
178
log
plain
d---------
diamond
109
log
plain
d---------
dsr-pdb
178
log
plain
d---------
edlib
146
log
plain
d---------
emboss
178
log
plain
d---------
exonerate
146
log
plain
d---------
fasta
178
log
plain
d---------
fasta3
178
log
plain
d---------
fastahack
178
log
plain
d---------
fastdnaml
146
log
plain
d---------
fastool
109
log
plain
d---------
fastp
141
log
plain
d---------
fastqc
146
log
plain
d---------
fasttree
141
log
plain
d---------
fastx-toolkit
178
log
plain
d---------
figtree
109
log
plain
d---------
fluctuate
141
log
plain
d---------
freebayes
141
log
plain
d---------
garlic
178
log
plain
d---------
gatk
141
log
plain
d---------
gcta
141
log
plain
d---------
gemma
178
log
plain
d---------
generand
109
log
plain
d---------
gff2ps
109
log
plain
d---------
gmap
185
log
plain
d---------
gperiodic
146
log
plain
d---------
graphlan
146
log
plain
d---------
grappa
141
log
plain
d---------
groopm
109
log
plain
d---------
haplohseq
178
log
plain
d---------
hhsuite
178
log
plain
d---------
hisat2
178
log
plain
d---------
hmmer
217
log
plain
d---------
htslib
178
log
plain
d---------
hyphy
146
log
plain
d---------
igv
178
log
plain
d---------
infernal
178
log
plain
d---------
iolib
178
log
plain
d---------
iqtree
141
log
plain
d---------
jalview
178
log
plain
d---------
jellyfish
178
log
plain
d---------
kallisto
141
log
plain
d---------
lagan
141
log
plain
d---------
lamarc
141
log
plain
d---------
libbigwig
141
log
plain
d---------
libgtextutils
178
log
plain
d---------
libsbml
178
log
plain
d---------
linux-foldingathome
178
log
plain
d---------
mafft
178
log
plain
d---------
mapm3
178
log
plain
d---------
migrate
178
log
plain
d---------
minimap2
141
log
plain
d---------
molden
141
log
plain
d---------
mopac
146
log
plain
d---------
mothur
141
log
plain
d---------
mrbayes
185
log
plain
d---------
mummer
178
log
plain
d---------
muscle
141
log
plain
d---------
ncbi-blast+
178
log
plain
d---------
ncbi-cxx-toolkit
141
log
plain
d---------
ncbi-toolkit
178
log
plain
d---------
ngs-sdk
178
log
plain
d---------
p5-AcePerl
178
log
plain
d---------
p5-Bio-ASN1-EntrezGene
146
log
plain
d---------
p5-Bio-Cluster
146
log
plain
d---------
p5-Bio-Coordinate
146
log
plain
d---------
p5-Bio-DB-EMBL
146
log
plain
d---------
p5-Bio-DB-NCBIHelper
146
log
plain
d---------
p5-Bio-Das-Lite
146
log
plain
d---------
p5-Bio-Das
146
log
plain
d---------
p5-Bio-FeatureIO
146
log
plain
d---------
p5-Bio-GFF3
146
log
plain
d---------
p5-Bio-Glite
146
log
plain
d---------
p5-Bio-Graphics
146
log
plain
d---------
p5-Bio-MAGETAB
146
log
plain
d---------
p5-Bio-NEXUS
146
log
plain
d---------
p5-Bio-Phylo
146
log
plain
d---------
p5-Bio-SCF
146
log
plain
d---------
p5-Bio-Variation
146
log
plain
d---------
p5-BioPerl-Run
178
log
plain
d---------
p5-BioPerl
146
log
plain
d---------
p5-TrimGalore
178
log
plain
d---------
p5-transdecoder
146
log
plain
d---------
paml
178
log
plain
d---------
pbbam
178
log
plain
d---------
pbseqan
146
log
plain
d---------
pear-merger
109
log
plain
d---------
phrap
178
log
plain
d---------
phred
141
log
plain
d---------
phylip
146
log
plain
d---------
phyml
141
log
plain
d---------
picard-tools
141
log
plain
d---------
plink
178
log
plain
d---------
pooler
109
log
plain
d---------
primer3
141
log
plain
d---------
prodigal
109
log
plain
d---------
prodigy-lig
109
log
plain
d---------
protomol
178
log
plain
d---------
psi88
141
log
plain
d---------
py-Genesis-PyAPI
109
log
plain
d---------
py-biom-format
109
log
plain
d---------
py-biopython
109
log
plain
d---------
py-bx-python
109
log
plain
d---------
py-cutadapt
109
log
plain
d---------
py-dnaio
109
log
plain
d---------
py-ete3
109
log
plain
d---------
py-gffutils
109
log
plain
d---------
py-gtfparse
109
log
plain
d---------
py-hits
109
log
plain
d---------
py-loompy
109
log
plain
d---------
py-macs2
141
log
plain
d---------
py-multiqc
141
log
plain
d---------
py-orange3-bioinformatics
109
log
plain
d---------
py-orange3-single-cell
109
log
plain
d---------
py-pandas-charm
109
log
plain
d---------
py-pyfaidx
109
log
plain
d---------
py-pysam
141
log
plain
d---------
py-scikit-bio
109
log
plain
d---------
py-xenaPython
109
log
plain
d---------
pyfasta
109
log
plain
d---------
python-nexus
109
log
plain
d---------
rainbow
141
log
plain
d---------
rampler
141
log
plain
d---------
recombine
141
log
plain
d---------
ruby-bio
146
log
plain
d---------
rubygem-bio-executables
109
log
plain
d---------
rubygem-bio-old-biofetch-emulator
109
log
plain
d---------
rubygem-bio-shell
109
log
plain
d---------
rubygem-bio
109
log
plain
d---------
samtools
178
log
plain
d---------
scrm
141
log
plain
d---------
seaview
146
log
plain
d---------
seqan-apps
146
log
plain
d---------
seqan
146
log
plain
d---------
seqan1
146
log
plain
d---------
seqio
141
log
plain
d---------
seqtk
141
log
plain
d---------
sim4
109
log
plain
d---------
slclust
141
log
plain
d---------
smithwaterman
178
log
plain
d---------
spoa
178
log
plain
d---------
stacks
146
log
plain
d---------
star
141
log
plain
d---------
stringtie
141
log
plain
d---------
subread
178
log
plain
d---------
tRNAscan-SE
178
log
plain
d---------
tabixpp
141
log
plain
d---------
treekin
109
log
plain
d---------
treepuzzle
109
log
plain
d---------
trimadap
141
log
plain
d---------
trimmomatic
178
log
plain
d---------
ugene
178
log
plain
d---------
vcf-split
109
log
plain
d---------
vcf2hap
109
log
plain
d---------
vcflib
178
log
plain
d---------
vcftools
146
log
plain
d---------
velvet
141
log
plain
d---------
viennarna
178
log
plain
d---------
vsearch
141
log
plain
d---------
vt
141
log
plain
d---------
wise
141
log
plain