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authormartymac <martymac@35697150-7ecd-e111-bb59-0022644237b5>2021-02-19 15:14:46 +0000
committermartymac <martymac@35697150-7ecd-e111-bb59-0022644237b5>2021-02-19 15:14:46 +0000
commit5f692d5e3f18ddf35f243d2143d483b193f53e2b (patch)
tree204912d10c077dd7fe9cf6351801dbe1835e7b11 /biology
parentd64862a03bb41c6357316d64e59e4bf926622f67 (diff)
downloadfreebsd-ports-5f692d5e3f18ddf35f243d2143d483b193f53e2b.tar.gz
freebsd-ports-5f692d5e3f18ddf35f243d2143d483b193f53e2b.tar.bz2
Introduce devel/onetbb and mark devel/tbb as legacy
Intel oneAPI tbb 2021.1 (onetbb) has been released[1][2] and has deprecated several interfaces over tbb 2020, breaking most dependent ports. Old tbb 2020 will be kept for a certain time to allow transition but will be removed in a near future as it CONFLICTS with devel/onetbb. New ports should now use devel/onetbb instead of devel/tbb. We tried to move a maximum number of dependent ports to devel/onetbb (or disable dependency when not possible), but some of them still remain stuck to devel/tbb. Remaining ones have not been identified as major dependencies themselves and will be fixed as soon as updates are available from upstream. PR: 252648, 252688 [3], 252683 [4], 252651 [5], 252690 [3], 252693 [3], 252695 [3], 252696 [3], 252786 [3], 252649, 252868 [6], 252870 [5], 252684 [7], 252785 [7] Approved by: yuri [3], jwb [4], thierry [5], FreeBSD@Shaneware.biz [6], maintainer timeout [7] [1] https://software.intel.com/content/www/us/en/develop/articles/intel-oneapi-threading-building-blocks-release-notes.html [2] https://software.intel.com/content/www/us/en/develop/articles/tbb-revamp.html git-svn-id: http://svn.freebsd.org/ports/head@566074 35697150-7ecd-e111-bb59-0022644237b5
Diffstat (limited to 'biology')
-rw-r--r--biology/bowtie2/Makefile4
1 files changed, 2 insertions, 2 deletions
diff --git a/biology/bowtie2/Makefile b/biology/bowtie2/Makefile
index d08202c62f7c..19b5c3765ddf 100644
--- a/biology/bowtie2/Makefile
+++ b/biology/bowtie2/Makefile
@@ -3,7 +3,7 @@
PORTNAME= bowtie2
DISTVERSIONPREFIX= v
DISTVERSION= 2.4.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= biology perl5 python
MAINTAINER= jwb@FreeBSD.org
@@ -15,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE
# Requires a 64-bit processor and depends on hard-coded SSE instructions
# Experimental support for AARCH64 as of 2.3.5
ONLY_FOR_ARCHS= aarch64 amd64
-LIB_DEPENDS= libtbb.so:devel/tbb
+LIB_DEPENDS= libtbb.so:devel/onetbb
RUN_DEPENDS= bash:shells/bash
USES= gmake localbase:ldflags perl5 python shebangfix